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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28917751, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEKSPSTS EIFEDASRDK HLQNKLRTVR ILDSVQTAIT LLGLLMGLTV LGVSANTLSV  60
   61 YDSTKPLPGS FLSLWPQEFN IRPTVALVAG SAIITVLHMV ALVFAKVQFL RTTSTAQVSL 120
  121 SFALPFFSLV AALIAVIFFY SVNASDSVDT FLSWTCRWRA VPMWTQPNWG TLCKQSKAGI 180
  181 YLSILLIPVE AGSPLLALEK IKPAGQRYGY YTLAAPTKEA CITVTDSTPA ILGDRDLCEV 240
  241 VEASVRGGTT IVQLREKTSD TGDMIAMGKK LHAITKKYNV PLLINDRVDV ALAVGCEGVH 300
  301 IGQDDMELST ARRLLGPDAI IGVTVSTIQE AMVACKGGAD YLGIGTVYAT PTKTNTKNII 360
  361 GAAGVRDILQ AMADAGYDHV KTVCIGGINA ENLQRIVYQS EAPSKKLDGV AVVSALVAAP 420
  421 DPEAAAKNLL GLFNSQPPFV RAATSPRAET ADSILELVPE VVLEVARKKP LSHNMTNLVV 480
  481 QNFAANVALA IGASPIMANN GEEAFDLCKL GGALVVNMGT VDPDGLQNYL KALRAYNSVG 540
  541 QPVVYDPVGA GATTLRRSAV KTILSHGYLD IIKGNEGEIR TVYGIYERET FQQRGVDSSA 600
  601 ELEVSQKAEL VRKLALREKN VVVMTGESDY LSDGQHTFRI DNGHAYLEMV TGTGCVLGTT 660
  661 ISAFVAAYPN DKLVATVVAL LHFEIAAERA AERRDVQGPG TFVPAFLDEL FKIRRETGQG 720
  721 RMGWLKSAKL TRLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle