YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85082932
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKATIAVIA AVSAAGGAAA TAAMLSLKSD KKVDTTSLNA PVPAAPSKPG PVPASQVFSA  60
   61 PALAGGYKPV DPSAFFEYGF PGPVADLATR QGFVSSYDRR TKNPHWTVEH ITPESLSMSE 120
  121 GDRKKSTFVE DEAIPEKFRG KLKDYFRSGF DRGHQVPAAD CKWSQAAMDD TFYLSNMCPQ 180
  181 VGEGFNRDYW AHFEDFCRRL TKQYPSVRIV TGPLYLPKRD PSDNKWYVKY EMIGQPPNVA 240
  241 VPTHFYKVIF AEDGKKGGNV ALGAFVLPNA KIPNDKPLQD FEVPLEAVER ASGLEFASKL 300
  301 PVQRRKRLCA EANCSLIVKD YAERQKSFGK KQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	332	0.99