YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33519560, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSFLLCFM ICIVIMLFFS LFIVQEGQKG IILRFGKVLR DIDKNPVIYN PGLHIKIPGI  60
   61 ETVKIFDSRI QTMNNQADRF VTMEKKDLII DSYIKWRISD LGLYYLATGG GDIAQAEVLI 120
  121 KRKFSDRLRS ELGKLNVQGI VTDSRNQLMT DVRASLNYGT AGEEILENSH SEFNKFNLYS 180
  181 TQDNKINQQN RNNFVDCINP NSMTALGIEI IDVRIKQINL PTEVSDAIYQ RMRAERDAVA 240
  241 RRHRSQGREE SEKLRATADY EATRTLAEAK RQALIIRGEA DAETARLYAK TFNEDPEFYS 300
  301 LIRTLRAYEN SFKNNNDLMI LSSDSNFLRF MRSSNSTVLG H

Type	Start	End	Confidence
Signal Peptide	1	23	0.51
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	341	0.96