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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32477819, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQCRHWILSV AVAFGCQAMP TTAASKENGD SHVAQQTGRK PIVDESITDR GESDPSQTPS  60
   61 FDQTPSMPKN VPQQGKTAWS SLILGRLREI DKTPFRDELE AGQIQKYADL GHAHAQFVLG 120
  121 CMHAEGLGVP QNDVEAVRWF QRAAEQDFAV AQNWLGSMHQ QGRGIRQDDV QAFRWFHRAA 180
  181 QQGLSDAQFN LALCYRRGTG TPQDDFGAVH FLKLAAEQDH RWAQFDLGWM CYERRGGAGN 240
  241 DVDSVNWYRR AAVAGLDSAQ YNLGYMYDVG LGVEQDFVEA SSWYQKAADQ NHVMAQRAIG 300
  301 MMYRDGDGVT QDHSLDVEWF RKSAAQGYAL AQESLASMYF HGRGVPHDYH EAQEWYHAAA 360
  361 TQGERWSQQK LAWMHMVGRG VSTDEALAFY WVQKAAMQDL SWSQAELGRL YYPGQGVSLD 420
  421 DADALRWFRM AAEQDSPAAQ YMIGLMYSEG RGVEADETKA IQWYRKAAKQ HYALAQNNLG 480
  481 RAHQKGLGVA QDDLIAVHWY RKAAEQQLPV GQSNLGFMYL HGKGVEADEE LAVELFREAA 540
  541 EAGDAEAITV LAQRDEFHRS RRLKRIASMV STIGASLALV LVMARILRRP KMKTLPTGLS 600
  601 GMGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle