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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32446423, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNSTSQPLL GRTIHLLRDF AVTRSSALAW CILAISLAVT AIAWYLSSQY IRDRASDRFL  60
   61 FRVSEMEVSI EQRMLEYEQV LRGGVGLMEA SNSVSRAEWR TYFENSRFQE YYPGIQGVGF 120
  121 SRVVKADEND AFVESVRAEG FPEFDIRPDG ERDVYTAIVY LEPFDWRNQR AFGFDMYSEA 180
  181 TRRAAMDAAV ASGEPTISGV VKLVQETEDD VQQGFLLYLP VFENRETVEE EGQQLASVVG 240
  241 FVYAPFRTRD LMVGIRKSNL PDIDFKIYDG ESESTANLLY SSHLPMLRPA SEGNADFVLT 300
  301 KQLHLRGRDW TIHFESQPDF ISGGESAISL AVAFIGLLVD VLLFLVIGSI GRQQRQAERI 360
  361 AEQMTSEFRK AQKQFQAVCD TAHDPIVLLD ESRQVVYGNP ATMDAFGFSE DEVVGTSASR 420
  421 LFERSLRTEE SALSSITDDE LLCIRKDGTT FPARISISYW HDGEQQLAAI IVRDVTEQRR 480
  481 VDALIRQQIA ELSRSNRDLD AFAYVASHDL RSPLRNIKHL ADWVTEDTGD QLPVESAEHL 540
  541 KTLKQCIDRM EQLLDDLLQY SRAGRVHDRL TQVNTNDLVT RIFAMLAKPD AMQVCIDGEL 600
  601 PTLLTLKAPL ETCLRNLVNN AIKHHDRADG RVCVSAIDDG ELIQFIVEDD GPGIASRFQK 660
  661 KVFEIFRTVA PNSDWKNSSG MGLSIIKKTV ETYGGKIELQ SELGQGTRFI LHWPRQIVMP 720
  721 LESVEPPVSA ESEG

YRC Informatics Platform - Version 3.0
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