YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32307512
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTNAPLLP VETDKTSRSY GYFAGFGILA LTALSLCAAM LNTRTNADNL LATKMALRRS  60
   61 APTQMRMNRA SMPVIPLKSY ASSPRISRCT SVNAMMMPSS MPRGSFSPKT LASSPDREVS 120
  121 VNSLFGLGLP ELVVIGGVAA LIFGPSKLPE FGKQLGVTAK SLGSAVKEFN EELKDELKTE 180
  181 EENAAAKDAV SESKKTEEKT E

Type	Start	End	Confidence
Cytoplasmic	1	19	0.59
Transmembrane Helix	20	42	0.88
Non-Cytoplasmic	43	123	0.60
Transmembrane Helix	124	144	0.72
Cytoplasmic	145	201	0.53