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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32262235, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVVYSDALI IGGGLAGLRA SIAAKQAGLN TIVLSLVPVK RSHSAAAQGG MQASLGNSVK  60
   61 SDGDNEDLHF ADTVKGSDWG CDQNVARMFV TTAPKAIRQL AGFGVPWTRI QKGDRPAVIN 120
  121 GEKVTITEDD FRHGYIHSRD FGGTKKWRTC YTADATGHTM LYAVANEAYK LGVDIQDRKE 180
  181 AISLIHQDGR CYGAVVRDLV TGELIAYVSK GTLLATGGYG RVYRNTTNAV ICEGTGAAIA 240
  241 METGVAKLGN MEAVQFHPTP IVPSGILLTE GCRGDGGVLR DVDGYRFMPD YEPEKKELAS 300
  301 RDVVSRRMLE HIRNGKGVKS PYGDHLWLDI SILGRAHVER NLRDVQDICK TFAGIDPATP 360
  361 GVWAPVRPMQ HYSMGGIRTD YRGETYLKGL FAAGEVACWD LHGFNRLGGN SVSEAVVAGM 420
  421 IIGEYFTEYC QGANLDVQTT LLEKFVKKEE EYLASLLNST GNEDVYVLKN AMKDIMDNDV 480
  481 GIFRDGKSLQ EAVNKLEDLY KRSKNVRVQN KKLHNNPELE DAYRTPKMLK IALCVAKGAL 540
  541 DRTESRGAHT REDYPKRDDA NWLKRTLTSW EDPNQTLPTV TYEDLDIMKM EIAPGFRGYG 600
  601 AKGMIIEHPN SAIRQAEIEK ITQEIQAKGG DRYALQEALM PFNLQPQFKA RNQRLGDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle