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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30257539, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQFLLKSKS VLSNHFGFFL FAVILFWLKT YAAYVTEFNL GISNTIQKFL LFFNPLSSAV  60
   61 LFLGLALFAK GKRSYIWLIV INLLLSILLY ANVVYYRFFS DFITFPTLTQ TNNFGDLGGS 120
  121 IVALLHLYDP LYFLDTIILI VLVATKFANP KPIRVAKYKV SLVFVAGILL FSVNLGLAES 180
  181 DRPELLTRTF DRNYIVKYLG AYNYTIYDGI QSAKASTERA LADGDNMTEV RNYLTSTYAS 240
  241 PNPEYFGKGK GMNVIYIHLE SFQNFLIDYK LNGQEVTPFL NSFTKDANTL YFDNFFHQTG 300
  301 QGKTSDAEFM LENSMFGLPQ GSVFTTKSHN TYQSAPAILG QQGYTSAVFH GNYKTFWNRD 360
  361 DIYKSFGFNK FFDASYYDMN EKDVVNYGLK DKPFFNESIP LLETLKQPFY TKFITLSNHF 420
  421 PYPIDKEEAT IEPANTGDSS VDTYFQTARY LDESVKGFID YLKQSGLYDN SIIVMYGDHY 480
  481 GISDNHNAAM SKVMGKEINS FENAQLQRVP LIVRVPGVKG GVQHQYGGEI DVLPTLLHLL 540
  541 GTDTKNYVQF GSDLLSPDHK QVVAFRNGNF VSPTVTALNG KYYDTATGKP VEFTDEIKQN 600
  601 EQMAQNSLKY SDQVVNGDLL RFYTPEGFTP IDRSKYNYNN RDKNKTKVKT APEGEAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle