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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30249707, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTIRTAMGI RLLMALFILV PIRTEAALSL SDVPLFLTTA VDPNIIFTLD DSGSMQFEIM  60
   61 PDDLIPSTNS NSNTGDVRFV YPVREGTYGG STYSNYVVGF DANNGYTAKL RSSHVNTIYY 120
  121 DPTVRYLPWS KADGSLMIDA KITCAPHNPW LIPNKNDPAK DCRNLTVNNS QSAGWLQSNN 180
  181 TLKTESRTFY PAVYFHYKGS GNINSASSYD QIEIKPENAP FNGGENRTDC ANSSACTYDE 240
  241 EIQNFANWYT YYRSRVLLAR AGVGRAFAAQ GGNMRIGFGA INKGSSTIDG KSTATLITGV 300
  301 RQFSGTDRTN FFDQLYKHTI PQQGTPLRNA IKDVGEYLKR SDDQGPWSDT PGQTGGTQPV 360
  361 CRQNYHILMT DGYWDGTDSP GIGNSDGADG SVIINHFPNA APATYQYKPV LPYSDNRSDT 420
  421 LADVAMHYWK NDLRSNLANK VPTNAKDPAF WQHMVNFTVG LGVQGSLTSL PGSPGGPTGW 480
  481 PNPTSSDSAK IDDLWHAAVN SRGEFFSAQD PATFAAGLTN ALTNITARVS SAAAVTTNTS 540
  541 RLNTGAQIYQ AKFNSADWSG QLLAFNLESD ASLGELQWEA SEQLPAHADR SIFTHNGTNG 600
  601 LAFTVANFSS LSTAQQAALD KNDGQGMARI GWLRGDKSGE ISQGGSFRNR NNGVLGDIVN 660
  661 SDLLYIKSLD FSYDSLPAAT PGQASYHSYR QSNNSRTPVV YTGANDGMLH AFNAETGVEL 720
  721 FAYVPAAVYS GLNRLTASSY THRYFVDGNA YVGDAYMGAT PAWKTVLLGT LGGGGKSVFA 780
  781 LDITDPVNFS EPDVLWEFTD ADLGYVHGQA KIARLNDGSW AAIIGNGYNG NSDRAWLFIV 840
  841 DLQTGALIKK IPTNASTSNG LSTPALVDTN GDKIIDVVYA GDLRGNVWKF DLSQSDSTQW 900
  901 DVAYKSGSAS VPLFTARNAS NQAQPITSPL EVGYHKQGGY MIFFGTGQFV AESDKTDKKV 960
  961 QSLYGIWDKG SPIAETNRSV LQQQTITAET VIPPFERTVS DHSVDWSTKR GWYIDLLQSP1020
 1021 EGTQQGERSV IMPMLNFGRI IFTTLIPSID PCEAGGRNWL MLLDAETGGM MPKPQFDTNG1080
 1081 DGKLNNNDRV IAAVGSDGIR SESVAISAGS LTHLIAATTT GAVEKVTISN GAPPPRRSWK1140
 1141 QLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle