YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30248846, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPQNGRGA LFAGGLAAIL ASTCCLGPLV LVALGFSGAW IGNLTILEPY RPIFIGAALV  60
   61 ALFFAWRRIY RPAEACKPGE VCAIPHVHTT YKLIFWIVAV LVLVALGFPY VMPFFY

Type	Start	End	Confidence
Cytoplasmic	1	9	0.95
Transmembrane Helix	10	36	0.86
Non-Cytoplasmic	37	49	0.80
Transmembrane Helix	50	70	0.90
Cytoplasmic	71	90	0.95
Transmembrane Helix	91	112	0.91
Non-Cytoplasmic	113	116	0.84