YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56384094, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMQPSRFSI NNLPRFKDVI TGRDAHPCAI KITMKRKRLF LLASLLPMFA LAGNKWNTTL  60
   61 PGGNMQFQGV IIAETCRIEA GDKQMTVNMG QISSNRFHAA GEDSAPVPFV IHLRECSTVV 120
  121 SERVGVAFHG VADGKNPDVL SVGEGPGIAS NIGVALFDDE GNLVPINRPP ANWKRLYSGS 180
  181 TSLHFIAKYR ATGRRVTGGI ANAQAWFSLT YQ

Type	Start	End	Confidence
Signal Peptide	1	52	0.80
N-region	1	43
H-region	44	49
C-region	50	52
Cleavage Site	52	53
Non-Cytoplasmic	53	212	0.99