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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30041908, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQKETTATT RFSLLPGSIT RFFLLLIIVL LVTMGVMVQS AVNAWLKDKS YQIVDITHAI  60
   61 QKRVDTWRYV TRQIYDNIAA TTSPSSGEGL QETRLKQDVY YLEKPRRKTE ALIFGSHDNS 120
  121 TLEMTQRMST YLDTLWGAEN VPWSMYYLNG QDNSLVLIST LPLKDLTSGF KESTVSDIVD 180
  181 SRRAEMLQQA NALDERESFS NMRRLAWQNG HYFTLRTTFN QPGHLATVVA FDLPINDLIP 240
  241 PGMPLDSFRL EPDATATGNN DNEKEGTDSV SIHFNSTKIE ISSALNSTDM RLVWQVPYGT 300
  301 LLLDTLQNIL LPLLLNIGLL ALALFGYTTF RHFSSRSTES VPSTAVNNEL RILRAINEEI 360
  361 VSLLPLGLLV HDQESNRTVI SNKIADHLLP HLNLQNITTM AEQHQGIIQA TINNELYEIR 420
  421 MFRSQVAPRT QIFIIRDQDR EVLVNKKLKQ AQRLYEKNQQ GRMTFMKNIG DALKEPAQSL 480
  481 AESAAKLNAP ESKQLANQAD VLVRLVEEIQ LANMLADDSW KSETVLFSVQ DLIDEVVPSV 540
  541 LPAIKRKGLQ LLINNHLKAH DMRRGDRDTL RRILLLLMQY AVTSTQLGKI TLEVDQDESS 600
  601 EDRLTFRILD TGEGVSIHEM DNLHFPFINQ TQNDRYGKAD PLAFWLSDQL ARKLGGHLNI 660
  661 KTRDGLGTRY SVHIKMLAAD PEVEEEEERL LDDVCVMVDV TSAEIRNIVT RLLENWGATC 720
  721 ITPDERLISQ DYDIFLTDNP SNLTASGLLL SDDESGVREI GPGQLCVNFN MSNAMQEAVL 780
  781 QLIEVQLAQE EVTESPLGGD ENAQLHASGY YALFVDTVPD DVKRLYTEAA TSDFAALAQT 840
  841 AHRLKGVFAM LNLVPGKQLC ETLEHLIREK DVPGIEKYIS DIDSYVKSLL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle