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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24113444, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAGIERRAG IRMTEKVKQH AAPVTGSDEI DIGRLVGTVI EARWWVIGIT VVFALCAVVY  60
   61 TFFATPIYSA DALVQIEQNS GNSLVQDIGS ALANKPPASD AEIQLIRSRL VLGKTVDDLD 120
  121 LDIAVSKNTF PIFGAGWDRL MGRQNETVKV TTFNRPKEMA DQVFTLNVLD DKNYTLSSDG 180
  181 GFSARGQAGQ MLKKEGVTLM VEAIHARPGS EFTVTKYSTL GMINQLQNSL TVTENGKDAG 240
  241 VLSLTYTGED REQIRDILNS IARNYQEQNI ERKSAEASKS LAFLAQQLPE VRSRLDVAEN 300
  301 KLNAFRQDKD SVDLPLEAKA VLDSMVNIDA QLNELTFKEA EISKLYTKVH PAYRTLLEKR 360
  361 QALEEEKAKL NGRVTAMPKN QQEIVRLTRD VESGQQVYMQ LLNKEQELKI TEASTVGDVR 420
  421 IIDPAITQPG VLKPKKGLII LGAIILGLML SIVGVLLRSL FNRGIESPQV LEEHGISVYA 480
  481 SIPLSEWQKA RDSVKTIKGV KRYKQSQLLA VGNPTDLAIE AIRSLRTSLH FAMMQAQNNV 540
  541 LMMTGVSPSI GKTFVCANLA AVISQTNKRV LLIDCDMRKG YTHELLGTNN VNGLSEILIG 600
  601 QGDITTAAKP TSIAKFDLIP RGQVPPNPSE LLMSERFAEL VNWASKNYDL VLIDTPPILA 660
  661 VTDAAIVGRH VGTTLMVARY AVNTLKEVET SLSRFEQNGI PVKGVILNSI FRRASAYQDY 720
  721 GYYEYEYKSD AK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle