YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30040724, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIIFGEKCV LLLRLFFAAV LMLWCAQTAA YIGQCHTTQG NPYIGVNFGV KTLDEEENTA  60
   61 GVVKDKFYQW NESNDYYVSC DCDKDNVRSG RWAFAADSPL VYLGDNWYKI NDYLAAKVLL 120
  121 QVKGSSPTAV PFENVGTGAD TRWHICDPGG QRLGGQGASG NSGSFSLKIL QPFVGSVVIP 180
  181 PMALARLFEC YNIPAGDSCT TTGTPVLVYY LSGTINSLGS CSVNAGETIE VDLGDVFAAN 240
  241 FRVVGHKPLG ARTAELAIPV RCNTGNAGLV NVNLSLTATS DPSYPQAIKT SRPGVGVVVT 300
  301 DSQHNIISPA GGTLPLSIPD DADSIRE

Type	Start	End	Confidence
Signal Peptide	1	28	0.93
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	327	0.99