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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29898966, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQTMNPKLK KYKRLFFTAM FSCVLFFVFS FFVIIIVAKI MGPPPVAVPQ TSVFYANDDT  60
   61 VIGQSNEIQK RYNVSLNEIS PYVKEATLSI EDQRFYKHHG FDVKRIAGAI VADLKAMAKV 120
  121 QGASTITQQY ARNLYLDHDK TWKRKLLEAM YTIRLEVNYN KNHILEGYLN TIYYGHGAYG 180
  181 IEAASRLYFD KTAKELTLAE ASMLAGIPKG PSVYSPFLKE DRAKGRQALI LDEMVKQGYI 240
  241 TKQQATLAKK ETLTFASLDT KKVAEVAPYF QDAVQASLLR DVGLDEQALQ RGGLRIYTTL 300
  301 DPKLQAVAEQ AVKDHIPDTT NIQTALVSMN PTTGEVAALV GGTDYNMSQF NRATQAVRQP 360
  361 GSTFKPFLYY AALERGFTPA TRLKSEYTVF TLGDGVSKYK PKNYKDYYAD DFVTMAQALA 420
  421 VSDNIYAVKT NLFLGDDTLA KTAKQFGIKS ALKDVPSLAL GTSPVKPIEM VNAYSMFANG 480
  481 GKEVKPTFIR RIMDHEGNIL YDAHLESKQV LDKSKAFVME EMMTGMFNKK LSSYAAVTGQ 540
  541 SMLSKLSRTY AGKSGSTETD SWMIGFTPQI VTGVWVGYDQ PKSISNVAEQ GYAKKIWTDT 600
  601 MEKGLDGQPK KEFKQPSDVV AVNINPENGK IATKNCPISV KMYFAKGTEP TEYCMDHVDD 660
  661 KEEFEKTTEE KKKTSWWKKY LPW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle