YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30023310, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEETISLKEL FHILKKRLAM ILVIAFGAAI VSAIISFFFM TPIYQSSTQI LVNQKKQEGA  60
   61 AIQLGEIQSN IQLTNTYKVI IKSPVILDRV NEKLNLNMTA QALTKKINIA NEKDSQVISV 120
  121 TAEDKDPKLA RDIANATADV FKDEVAKIMN VDNVTVLSKA EVAENQSPIK PRPMLNVAIA 180
  181 FVVGLMASVG LAFLLEYLDN TVKKEEDVEN LLGLPVLGIV ARMDEETMNV KSHAPSSRKV 240
  241 RGQTIGS

Type	Start	End	Confidence
Cytoplasmic	1	17	0.98
Transmembrane Helix	18	41	0.91
Non-Cytoplasmic	42	174	0.97
Transmembrane Helix	175	195	0.76
Cytoplasmic	196	247	0.77