YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30023307, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVRKAIIP AAGLGTRFLP VTKAMPKEML PIVDKPTIQY IVEEAIESGI EDIIIVTGKG  60
   61 KRAIEDHFDH SFELEQSLLE KGKHEMLEKV QASSKINIHY IRQKEPKGLG HAVWCARKFI 120
  121 GNEPFAVLLG DDIVQAETPC LRQLMDQYEG TQSSVIGVQT VPENETHRYG IIDPVEQNDR 180
  181 RYQVRQFVEK PEQGTAPSNL AIMGRYVLTP EIFMFLENQQ TGAGGEIQLT DAIQRLNEVQ 240
  241 RVFAYDFKGT RYDVGEKFGF IKTTIEMALQ NEELNVELMK YMKELVKKEE VHS

Type	Start	End	Confidence
Signal Peptide	1	24	0.76
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	293	0.99