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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29898825, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFTVFVALA LWLKTYLITR TSFDLKLESF MQEFILFLSP LAASLLLVGL ALFAKGKKRN  60
   61 YIALGINFVL TIVLVGNVMF YGFYNDFVTL PVLGQTSNFG SLGSSVKELF NYKIILAFAD 120
  121 IIVFFVLLKK MKNFAPTERV ARPMRSLYFV STVAIFFANL GLAEAERPEL LTRSFDRVML 180
  181 VKNLGLYVHQ VYDLGLQAKS SSQKAFADGS KLQETENYVK TTHSKPDPNM FGTAKGKNVI 240
  241 VVSLESLQTF LIGATVNGQE VTPFLNQFTK ESYYFDNFFH QTGQGKTSDA EFLVDTSLYP 300
  301 LDRGAVFFTH GNNEYTATPE ILRQQGYHTS VFHANNATFW NRNIMYPALG YDRYYNELDY 360
  361 KITPETKLNW GLKDIEYFDQ SIDMLKQVKQ PFYTRFLTLT NHYPFTYDDS TKLIDEYNSG 420
  421 DGVFDRYMVT ARYLDEAMKH FIERLKAEGI YDNSVIVFYG DHYGISENHN RAMAQFLGKE 480
  481 EITAFDHMNL QKTPMFIHVP GQKEGKTISK PTGEIDIKPT ILNLLGVDST NDVRFGHDVF 540
  541 SPDNKGFVVL RDGSFVTDKY MYTNSTFYDR ATGEVVQLPK EESQPLIDRA QNELNMSDKI 600
  601 IEGDLLRFSE SNKIKTGEVK TVIKEEKKSA E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle