YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29898797, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRVFQCII LFLTITMYVS SNTEATTVIP AEYHPNTETT SPTQKIAYLT FDDGPNKYTT  60
   61 QILNILKEKN GKATFFVIGG KVPHYKKTMQ RLIKDGHYIG LHSMSHDVKR LYTGDPSTLI 120
  121 AEMEQTQSIV QQVTKLNTHL VRVPYGSMPY LKKNYRDALV SAQYKMWDWT IDTYDWKSYD 180
  181 NPSAILERVR NQSDEQVEVI LMHDSSVTVQ ILPKVIDYLQ SQGYKLLPYN PSSHLKVNFW 240
  241 KDTRL

Type	Start	End	Confidence
Signal Peptide	1	25	0.91
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	245	0.99