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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30022663, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFRSRLLF TFVSLIVFIL VGLGLLLETV FENYYIDHAK ERMVKETEYV ATLAEEQGFD  60
   61 NVLKNPYVFE KLEEKIPASI VFLDEKKKVQ YRKGQELAFS PETIKELSSE VAKQRSKVIT 120
  121 KETDRKNEFY HAVFVQDVEG KQGYILVKSI IDPLRDVHQK TWGLLIIGFV IACLVVVFLG 180
  181 MKITGQYIRP IESVTKVAIE LAKGNYKARA YESHSDETGM LSKAINILAR NLQEMTLEQE 240
  241 MQQDRLHTLI ENMGSGMILI DSRGYINLVN RSYKETFHVT DEEYLDRLYY ESFHHTEIIE 300
  301 LVEEIFMTEV KVRKQMLLPL GIERKHFEVY GAPIIGTNHE WKGIVLVFHD ITELKKLEQM 360
  361 RKDFLANVSH ELKTPITSIK GFSETLLDGA MDNKKFCEHF LHIILKESER MQGLIEDLLD 420
  421 LSKIEQQGFK LNMGTVDMKG LLEDIHMVLD NKAGEKEISL QVNVLKRASV IGDPSRLKQI 480
  481 FINLINNAIV YTPAGGVVSV ELAEDKYNAY IKVSDTGIGI SKEEIPRIFE RFYRVDKARS 540
  541 RNTGGTGLGL SIVKHLVEAH QGTITVDSEV GEGTTFTVVL PKSATEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle