YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30022218, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIQNISFLG AGSIAEAIIG GLLHANVVKG EQITVSNRSN ETRLQELHKK YGVKGTHNKK  60
   61 ELLTDANILF LAMKPKDVAE ALTPFKEYIN NNVLIISLLA GVSTDSIRKL LQKDVPIIRA 120
  121 MPNTSAAILK SATAISPSKH ATAEHIRTAT SLFETIGLVS VVEEEDMHAV TALSGSGPAY 180
  181 IYYVVEAMEE AAKKIGLKED VAKSLILQTM IGAAEMLKAS DKHPSILRKE ITSPGGTTEA 240
  241 GIEVLQEHKF QQALISCITQ ATKRSHNLGK TLEQLTKEK

Type	Start	End	Confidence
Signal Peptide	1	17	0.42
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	279	0.93