YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229111397, gi...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKMKEPKIG LALGSGGAKG FAHIGVIKVL REAGIPIHMI AGSSMGALIG TFYAASSNVE  60
   61 RLYKLASVFK RKYYLDFTVP KMGFIAGKRV KDMIKMFTYN KNLEELDIPT AVVATDILKG 120
  121 EKVVFTSGPV ADAVRASISV PGVFVPEKID GRLLVDGGVI DRIPVSVVKE LGADIVIAVD 180
  181 VSPIKVNGDV TSIYDVIMQS IEIMQHELVM NRQIASDLMM RPAVEQFSSR AFTNIEDIIR 240
  241 VGEVEAEKHI SNIYLLIEQW KEKHNV

Type	Start	End	Confidence
Cytoplasmic	1	8	0.77
Transmembrane Helix	9	27	0.71
Non-Cytoplasmic	28	34	0.77
Transmembrane Helix	35	55	0.77
Cytoplasmic	56	266	0.73