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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|228723847, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSNVTVRK RLIFILISGI LIFTIIDIRL GYVQFFLGNM LTDRAKDSWS RNITFEPERG  60
   61 KILDRNGVEL ATNKSAPTVF VVPRQIEKPA ETAEKLAAVL GVEKDEIYKR ITKKESIVRL 120
  121 DKGGRKISHD KAKEVRGLSL KGVYIAEDSI RYYPFGNFLS HVLGFAGSDN QGLMGLEKYY 180
  181 DKELNGDKGH VRFFADAKGQ RMPNVGDDFK KPEAGLNLGL TIDARITRIM EREMNIAEST 240
  241 YNPDGMIAIA MNPKNGEILG MSSRPSFDPA DFQSVSPEVY NRNLPVWSTY EPGSTFKIIT 300
  301 LAAALNENLV DLEKDTFYDD GAAEVGGARL KCWKAGGHGS QTFLEVVQNS CNPGFIELGD 360
  361 RLGKDRLFKY IRNFGFGQKT GIDLQGEGSG ILFNLDKVGP VEQATTSFGQ GVSVTPIQQV 420
  421 AAVAAAVNGG TLYQPYIAKE FIDPKNNQVV SKKTPVEKRK VISKETSEKV RYALENVVAK 480
  481 GSGKGAYIDG YRVGGKTGTA QKVKDGKYLE NNYIVSFIGF APADDPEIVV YVAVDNPKGV 540
  541 TQFGGVVAAP IVGNILRDAL PVMGVKPRKE QVEKEYKWGD TPTVEVPNLI GMKKKDLQTQ 600
  601 LVDLKLDISG DGEKVIKQSP EAGAKVKEGS KIRIYFGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle