YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29897410, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKKLILKL FICSTIFITF VFALHDKQVV AASSVNELEN WSKWMQPIPD NIPLARISIP  60
   61 GTHDSGTFKL QNPIKQVWGM TQEYDFRYQM DHGARIFDIR GRLTDDNTIV LHHGPLYLYV 120
  121 TLHEFINEAK QFLRDNPSET IIMSLKKEYE DMKGAEDSFS STFEKNYFVD PIFLKTEGNI 180
  181 KLGDARGKIV LLKRYSGSNE SGGYNNFYWP DNETFTTTVN QNVNVTVQDK YKVSYDEKVK 240
  241 SIKDTMNETM NNSEDLNHLY INFTSLSSGG TAWNSPYYYA SYINPEIANH IKQKNPARVG 300
  301 WVIQDYINEK WSPLLYQEVI RANKSLIKE

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	329	0.99