YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29897339, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNGGINMLK KVFAMSTTVV LAAGLLSGCG TKESSASKNE DTKKGYVPKT LNVQFVPSQN  60
   61 ADTLEAKAKP LEKLLSDKLN IPVKVSISTN YNTIVEAMAS KQVDVGFLPP TAYVLAHEKK 120
  121 AANVILQAQR FGVEDETGAP TKDLVDYYKS EFVVKKDSNI NSVKDLKGKK IGYQDVTSSA 180
  181 GYVWPAAVLL KEGIDPLKDV KPVTLKGHDQ SLIALLNGDV DAAVVFQDAR NIVKKDYPNI 240
  241 FEQTKIVKFT EKIPNDTISV RSDLDEEWSK KLQDAFIEIG KNEEGHKIIK EVYSHEGYVK 300
  301 SDDSKFDIVR EYGKKVKTQ

Type	Start	End	Confidence
Signal Peptide	1	31	0.94
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	319	0.99