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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30021628, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKVIIRVF TLLSVLALFL NVFLPRASAE VMTHEKYSMD WSYSNSLGKY IRTEMIKNSS  60
   61 GQIAYCLTLG LKSPNGEDLP EMGKTDNVVY RVLLNGFPQK SAEQLGVANK NEAHYATQLA 120
  121 VWNALGQLDV NELKHENKNV EKAAKAIISN ANNSEETQDV FMNVIPAEKQ KAELKGEFFE 180
  181 TNLYSVQTNA KSGSYKVVAK NAPNGVRIVS ENGEVKDQLS VGEKFRIQIP KNTKTGEFNL 240
  241 SVAANLIKVQ AIAYRGTDTV QNATVLLERN EEKLSSDLAV NWEAAGSLKI KKVGENGEVL 300
  301 AGAVFEVFNV NNESVGKITT GADGMAELNN LPIGTYTLKE IKAPTGYVSD DKPQTIEVKT 360
  361 GETGAVQIVN NKVKGSIEIK KLSDSGKILP NVEFTVFTED GKEVKKVVTK ENGIANVEGL 420
  421 TYGKYYFLET KTPNGYIGNK TKYPFEIKEH NKTLTFTVEN TEVKGSVKLL KVDNEDISKK 480
  481 LEGAAFELKD ASGKVVGEYK TDKNGEINVK DLAYGKYSFV EKASPNGYVL VKEPIMFEIK 540
  541 EHGKIIELLA VNHLIKGDLE ITKVDVADGN NKLPNAEFTI YNEAGKEVVK GKTDDKGIAK 600
  601 FEKLPFGKYT YKETVAPKGY VLNEETFSFE IKENGQIIKH IVKDEKIPSI ETKATDKTDG 660
  661 TKEMHTSKSV TIQDKVEYKD LQVGKEYTLK GKLMNKETNK PLVVNGKEVT AETKFTPKEA 720
  721 NGSITLDFTF DATGLEEKEV VVFEELLKDG KVVTTHADIN DKGQTVKFVK PSVKTTATNK 780
  781 ADGGKEIHSK DSITIQDKVE YTNLVVGKEY TVKGKLMNKA INKPLLIDGK EVTAETKFTA 840
  841 KEKNGFVTLD FTFVGAEQQG REVVVFEDLL HEGQVIATHA DINDVGQTVR FVEPFIKTTA 900
  901 TNKADGSKEL DASKSVTIQD KVEYKDLIVG KEYVVKGKLV DKATNKPLLV DGKEVTVESK 960
  961 FTAKEKNGSI TLDFTFNASA LQGKEVVVFE ELYQDNILVA IHAEIEDKGQ TVKFKEGKSE1020
 1021 QPKPEQPNSG KNTTTPEQPN EQVKEQPQLK KEIQSKIGWL PQTGTNLTSW ISMAAGALLL1080
 1081 IVGGVIFLKR KNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle