YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29897099, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKLFIGGI FTLISVISVV VYLVFQGIFI PNQISADKYE IKGVDVASYQ GDIDWRELEK  60
   61 QNMKFAFIKA TEGSSFVDEY FSKNWRNANK TDMRIGAYHF FSFDSKGETQ AEQFIRTVPK 120
  121 YKQALPPVID VEFYANKKDN PPKREDVTKE LAVMIEMLEK HYDKKVILYA TQEAYDLYIK 180
  181 DAYPKCNIWI RSVLTKPSLS DERKWTFWQY TNRGRLSGYN GKEKYIDLNV FYGNEEEFEN 240
  241 YGMKD

Type	Start	End	Confidence
Cytoplasmic	1	6	0.82
Transmembrane Helix	7	25	0.90
Non-Cytoplasmic	26	245	0.97