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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|228654974, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKNKLTGVL ATALAVTMIL PTGAKAFSES KTTVVTGEEV ASQELKKSAA EKAELLTKSH  60
   61 GAASVQYALI DNGKLILSGQ AGKNDMEGEK PLTKDTLYGI GSVSKMYATA AVMKLVDEGK 120
  121 VDLDAPVVRY VPDFKMKDGR YKRITPRMLL NHSSGLQGST LGNAFLFNDN DTYAHDTLLQ 180
  181 QLSNQNLKAD PGAFSVYCND GFTLAEILVE RVSGMSFTEF LHQNFTGPLK MNHTKTPQDK 240
  241 WRDENRAGLY YSAYQGQLPI ESVNVIGTGG ISSTAEDMVR FSQLFMGQGK GILSDKVVKA 300
  301 MEQEEYKKGM WPGAGENIFN YGLGWDSVKL YPFSEYGIKA LAKGGDTALQ HAILVVLPEQ 360
  361 KIAAAVLTSG GRSSTNQLMA TELLLATLKE KGTIKEIKPN KSFGKPVKVK MPQGVAKKAG 420
  421 FYGNSETHFK IEITKNGELF LPSNPEEKYV YTADGSFINE GGTSKLNFVT EKNGRTYLKE 480
  481 SAYKSYPGLG QSVMTHYLAE KLEDNVLSKK TAAAWAKREG VKFYRVNEKF SSIQYLVQSK 540
  541 HLSTQITRKE GPAGYWDGRK ITGPNTAVHQ IQVPVMNGRD TTETHFYTEG GNEYIEMAGL 600
  601 LYVSESNVKP IDVGQSSKVT LGANGHAKWF TIPQAATDKR MTVTLPSNGS FAVYDEKGVC 660
  661 VNFTIVSGNN KVELPKNGTI VFAGAPKSEF AISVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle