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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29896654, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLVAAIIVS VLSMESMMNY HAAKAKVKKV EHQPKNIIMM VMDGTSSTAT TLARWYKGAP  60
   61 LTLDQIVTGG VRTFSAESAI TDSAPAATAL ATGNKSNSGY VGVLPSIVSS PSLEPIKEED 120
  121 KLRPVANVLE GAKRTGRATG IVATSEIQHA TPAGFSAHHV NRKQFDVIAK QQVYQNIDVV 180
  181 LGGGKAALLP MQSNGIRKDG ENLVKVIQDK GYDFVETKDA LLNSKSNKIW GSFSHHALAF 240
  241 DMDRIETNPE QPTLSQMTEK AIQTLSKDKD GFFLFIEGSK PDWAAHANDP IGMISDVLAF 300
  301 DEAVAKALQF AKKDGDTMLI ALTDHGNSGI SIGNINTTKG YNTTPVSAYI DSLKKAKMTL 360
  361 EGTINKLKSD LSNVEDVAKL YGLDNLTHDE KEKLKAAKKK MDVGRILTTL LANRANIGFT 420
  421 TGGHTGEDVF LHSYGPQKPE GLIQNTDIAK TMAKAMGFNL EEVTNKIFLE SEQAFKKIGA 480
  481 TVTADKTEGA NPLLVVKRNK VEAQLFGNKN IIRINGKGYE LGSIIVESNG KCYVPEEAIQ 540
  541 LFVKHSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle