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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|228655179, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKWQSKEQL VQLLSSLVEI PSITGSEAEV ILPDFVVEQL SDLQYFKQNP HHLQKNPTGD  60
   61 GRYFVTALVK KSDSTKNTVI LVSHFDVVDV QDYGMWKEDA FNPKKLTSMF YSHKDELPDH 120
  121 VREDIEHGEW LFGRGTMDMK CGLALQMAMI EQACEERFDG NVLLLAVPDE EVNSVGMRAA 180
  181 VPRLLELARE HDLEYKTVLN SEPMFSRHPG DQNKYIYTGS IGKVLPGFLC YGKETHVGEP 240
  241 FAGLNGSYMA SLITAELELN TDLCDIVEGE ASPPPTNLLQ RDLKEDYSVQ IPHRAVTLFN 300
  301 LFLLEKSMTD VVSLLRQKVT KVAEKIEESY EKHAYRFSKY NPFIPPNLKV NVLTYEELIT 360
  361 YAIEQHGRGK INHIQSNIIK NRGDKDDRAV TIDLVDKLAI LCKEKAPMIV LFFAPPYYPA 420
  421 VSSRNNPLIK EVVVEMEKYA HYNHKITFEN QNYFGGISDL SYVGLQYPLD SMSSLVDNMP 480
  481 LWDKGYSIPL QELEEFDVPV LNMGPVGKDA HQWTERLDVN YAFETLLDML PKCIEKLLVS 540
  541 NKITQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle