YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229145402, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNSLQKMK KVILSGGVLL TGLLTFGFSE KASAHGYVES PASRSYLCKQ GVNVNCGPIQ  60
   61 YEPQSVEGIG GFPQLGPSDG QIAGAGHFPA LDVQTVDRWK KVTLNGGTNT FKWKLTAPHS 120
  121 TKEWKYYITK KGWNPNKPLT RSDLDLVPFY VKNDGGARPG TTVTHEANVP TDRSGYHLIL 180
  181 AVWEIADTGN AFYQVIDVNL LNNGLSSNFA FNNVVQAPTL F

Type	Start	End	Confidence
Signal Peptide	1	34	0.94
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	221	0.99