YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29896472, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNRFLKQLQ NMKMNKKSLG AVALTAGIIS TTLIPQNAYA HGFVEKPGSR SALCSSTYGA  60
   61 LNVNCGSVMY EPQSLEAPKG FPQGGPVDGQ IASAGGKFGG ILDQQTANRW FKNTITGGEN 120
  121 TFTWKYTAPH LTSKWHYYIT KKGWNPNKAL TRADFEPIGT VQHDGSAASN NLTHKINVPT 180
  181 DRSGYHVILA VWDVADTANA FYNVIDVNLI NDVKPDIEAP SIPNGLQTQK VTANSVELTW 240
  241 NASTDNVGVK GYQIFRNGEM IDTVIGTHFI DKKLQPSTEY SYTVKAIDAA GNVSKESTAL 300
  301 TVKTTVEIPD TEAPTQPKGL HSMGTTASSV DLMWSPSDDN IGVDHYDIYR ETEGSMKKIA 360
  361 TSNTASYMDK NLLANTTYKY VVKAVDVAGN ESVQSDIFTI TTKTESASYE AWDAKKAYKK 420
  421 GDRVLHEGKV YEAVQSYQGN GDPNWIYALS LWKTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle