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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30020856, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQITKRLIN KTVLLLTLIV MLSSVFSFQS VKAVSNSKTT EIIIHYKEKL GNTKDWNLWL  60
   61 WGENANGTSY QFTGEDEFGK YAKIKIDGDY NRVGFIVRTN EWEKDGGDRW IENIKDGRAE 120
  121 VWILSGDEKV YNSKPSSDLS IQKATIDSFH EITVTTNVPF HIKEKKIEIE GIKIKNITPY 180
  181 DINSGDITNK VKIITEQKID LKQTYKVKIE NLADTNTEIG KVIRSEEFDN LFYYGGNDLG 240
  241 NTYTPQHTKF RLWAPTASEA KLVTYKKWND KIGTEINMQQ GEKGTWTAEL KGNQKGLFYT 300
  301 YKVKIGDKWT EAVDPYVRAA SVNGDKGAVV NLEETNPKKW KANKKPKFKN PEDAIIYELH 360
  361 VRDLSIQPES GIKQKGKYLG VTEKGTKGPE GVKTGLDHIK DLGVTHVQFL PIFDYASVNE 420
  421 ETLNEPQYNW GYDPKNFNVP EGSYSTNPYE PTVRITELKQ MVQTLHDNNL RVVMDVVYNH 480
  481 MYNAAESNFH KLVPGYYYRY NEDGTFANGT GVGNDTASER KMMRKFMIDS VTYWAKEYNL 540
  541 DGFRFDLMGI HDYETMNEIR KAVNQIDPSI ILHGEGWDLN TPLAAELKAN QKNAEKMKGI 600
  601 AHFNDNIRDG LKGSVFEEKE NGFINGKENM EDRIKKGITA GIDYDTNSST YQDPEQVLTY 660
  661 VEAHDNHTLW DKLELTNPGD SDEVRTQMHK LSSSILLTSQ GIPFLHAGQE FMRTKYGDHN 720
  721 SYKSPDSINQ MDWLRRATFN NEVDYMKGLI ELRKKYSAFR MTSAEQIKTH VSFIDAPKNT 780
  781 VAYIIEGNKH EYFTVAHNAN REAVEITLPS KGPWKVLVDG KQARSKPLYV VHDNKIKVPA 840
  841 LSSIVLKSEK TIK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle