YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30020800, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIYLVTII CAFIIISIFV FQKINEHKYT KAMNQSNHIK NIAHRGASAF APEHTIAAYR  60
   61 LGQQMNGDYI EIDLQMTKDG YLVAMHDETL NRTTNGTGLV KEHTLEEVKQ LNAGSFFNEK 120
  121 YPNLAKKEFE NAKVPTLTEI IETFGHNANY YIETKTPDEY PGMEEKLLEI INHYEIQDKV 180
  181 IIQSFSEESL QKIHSLNSNI SLVQLLPYKK AVQLTKLEIE KYKMYCIGLG MNYKYIDSDY 240
  241 VKKIKKNGLE VHPFTVDNEK DMKKLLSWGV DGMFTNYPDR LHSILLDLKI HE

Type	Start	End	Confidence
Signal Peptide	1	22	0.56
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	292	0.89