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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229128002, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLQTNKGA RYMMIAFIVL FLIMILRIFY IQAVGVVHNV NVKDLANEQH NKKGVLEANR  60
   61 GTIYDQTGKV LVQDSTTYRV VVNLKGKDKV KNKDETAQQL ADALEIDKEE VLKNFHEGRT 120
  121 QVEIGKIGRN LSREKKEKIN DLKIPGVSFM SEKARVYPNE DFASYILGFA RPDDKGNTEG 180
  181 KFGLEKSLDK YLRSTNGNIE YVGTRRGIPL TNDIGKVEPA KNGNNVYLTL DKQINSFLEE 240
  241 AMNKAQEHYD PSMLIGIIAD PKTGKVLAMS SKPSYNPNVG DIEYFLNDPI ANAYEPGSTM 300
  301 KVFTLAAAIN EGVYNGKEYF QSGKYSVGSS DIKDHNGGFG WGSITFDEGF ERSSNVAFSI 360
  361 LEDQLLKPNK FKQYMNKFGF NQKTGIDLPG ESKNTLLLNT QIQQVTTSFG QGSTVTPIQL 420
  421 IQAATAIAND GKMMQPYIVD KVVNPTNKEV IMENQPKEIG NPIKKETADK VRSLMERVIT 480
  481 SSKGTGTMYK VDGYPIGGKT GTAQIPNPEN GRYMEGKENY IFSFLGMAPI DDPELIVYLA 540
  541 IKQPKLKGDE YGAQPLAEIF KPVIKNSLEY LKVKPYTEKQ IADAMKQSQL KVQNYVNQSM 600
  601 DTIEKSVEKE KLQPVILGEG KIIKQYPQSG EVMSEGDRIF LLGNNAQMPN VKGWSMRDIM 660
  661 YFSKLLKLDL KTSGTGYVTS QSIEKGQDLQ EGDTLELELE PPLQPLTEAN TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle