YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228801307, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNIYLTDRN GKLQEIEEMQ KGCWINVLHP TEEEIQYLVQ TLNVDLDFIK DPLDDEERSR  60
   61 IEKEDNNTLI IVDIPTVRHD EEGNSIYDTI PIGMIVMPDC FVTICLEENP IFERFINQRI 120
  121 KEFYTFKKTR FALQLLYTIS TYYLRYLKQI NRKTIDLEHQ LNQSMKNKEI FTLLGLEKSL 180
  181 VYFTTSLKAN KIVIQKLMRN STFLKMYEDD QDLLEDVLIE NKQAIEMAEI YSHILSGMMN 240
  241 TFSSVISNNL NSVMKLLTSI TIILSLPTMV SSFFGMNVKV PFEGEAHGFV IVLIICVTLS 300
  301 FTLAFVFWKK RYF

Type	Start	End	Confidence
Cytoplasmic	1	255	0.80
Transmembrane Helix	256	276	0.89
Non-Cytoplasmic	277	285	0.80
Transmembrane Helix	286	308	0.93
Cytoplasmic	309	313	0.88