YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29895457, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKIIITIV TLFFIITALF GTYKLMNARS FQLFGDLTQR VETNEKVIAL TFDDGPTNNV  60
   61 KQILPLLDKY NAKATFFLIG NELEQNLSLG EAIAQSGHQL GNHTYSHNRM VFKTPSFIKD 120
  121 EIEKTNSLIR QTGFTDEIDF RPPNGKKLIG LPYYLNKNNI ETITWDLEPD TFYKSAADKI 180
  181 KYVNKNVKPG SIILLHSMYD ESNENLQTIE GILDSLSKKG YQFVTVNELQ KRAK

Type	Start	End	Confidence
Cytoplasmic	1	4	0.52
Transmembrane Helix	5	22	0.50
Non-Cytoplasmic	23	234	0.97