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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30019830, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNRFVSVRQ VGMTVALLLV AMLIVIPLFL ILFSSVYENS SWNFLKPFEV MQSGGLAGIF  60
   61 LNSMLLGVLV VIGATIFAFP LAFIMSKTDV GKYSKLDIVF MIPFMTPPYI GSMGWILFMQ 120
  121 PNGYFEQFFP MLKTVSSSFF SLGGMVLIMS LHLFPFLYFM LKNTLLQIGS SKEEAAAVHG 180
  181 GSFFYRLRKI ILPLLVSSYV MGALLIFVKT IAEFGTPATF GRRIGFHVLT SEIHKFISSW 240
  241 PIDFSSATAL SSLLLSACML IWYMQNVLNR KYSYAIVSGK GVKSKRYTLS IFTRVVAWMY 300
  301 VIGLLIVSIG IPYFSILIAS FSKLRGGGLH VNNFTTSHYE ALFTMGSPGL EALWNSFLFS 360
  361 LVTAIIAVMI GVFLALMIRK GKKTSEKWLD MCGMLPNMVP GIVMVVGLIL FWNSPYMPMS 420
  421 IYNTPVMVIV TYVVLFLPYT VQYVKSSLGQ IDDSLMQAGS IFSGNYIYIF RKIILPLIIP 480
  481 GILAGWAMTF TISIRELVAS LLVLPPSVET SATFIFAQFE QGEVSIGMAM AVVSVGLTTI 540
  541 CLLLLPTYGA KTKRGSMMRV EVWGGAGEYG RSCYFVKNKE TKIVFDCGIN RSYEDSYPKI 600
  601 EREAVPFLDA VFLSHIHEDH TMGLPLLAKY GYKKKIWTTR YTKEQLPLYY EKWRNYNVLQ 660
  661 GWNLPYSDQH IKDLNYVCID EISNPNKWVQ ITPTLRFQWG YSGHVLGAVW FLVDMCNTYV 720
  721 FYSGDYSAES NILRANLPEK LGHNIKIAIV DAAYHTDDVS QNERVNELCA EIERVMQNKG 780
  781 IALLPLPQLG RAQDIVLYLY ERYKEFPLIV DKEILAGFEE MFVYKDWIKN NEEFKWIMES 840
  841 LKRNIIVMDN DISMQNSYGI VVMSDANMQT KRAQLYYEQL RNEKRNAVIF TGHIAKGSFA 900
  901 EKVMKEHVGK ECRVKRVPYK VHQSIRDVKE MLNTLLPEHT VLVHALKEDT DRLQQKLSTA 960
  961 GYENVYSLAM ERIEVI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle