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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29895170, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWRSVVGKL WMTILLLVSF VLGFVAILLS QFFRTYYVDM SEARLQKVAT SVSELIEEGA  60
   61 DVKTIENIAY KFSDPLSRII IVEDGKEISS SPKQEGLVTL TMDDLKEDKE LAAVFTDKKE 120
  121 IKNNIRKASN SRKNKNTEND IMIVGKPVQS KNQSAVFVYE SLQVPIQGME RTTDFIFLSA 180
  181 GIAIILTTFF AFFLSTRITA PLRKMREVAF EVSRGKFDAK APMVSQDEIG ELATALNQMG 240
  241 KQLKFNMNAL QQEKEQLASI LSSMADGVIT LNQEGEVVVI NPPAEHFLQV WQEEKEIELS 300
  301 KKLPSELVEL FHLVVESEQQ QVVEINLQKG NYVVLMTPLY NQTKIRGAVA VLRDMTEERR 360
  361 LEKMRQDFIA NVSHELRTPM VMLQGYSEAI LDDIVQTKEE IDEFVQIIYD ESVRLGKLVN 420
  421 ELLDLARMES GHVELHIGEV DIHPFVEKIG RKFQGIAKDK EVALTVDFKG PIEQYPFDAD 480
  481 RMEQVLTNLI DNAIRHTNAG GHVTLVIDTK NNGLIFEVQD SGAGIPEEDI PFLFDRFYKA 540
  541 DKARTRGKKG GTGLGLAIAK NIVQGHDGKI SVSSVVGEGT TFSVYLPNRI I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle