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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29895026, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNYMKALV VATTLAIPFA TYSTPALAAL KVEANQSVAA ASDRTYDTEI KIYKDQKDEP  60
   61 SMVSQYIKDP KVTIAAGKKI VTVTMQDSDY FQYLRIEDKN QPGVFHDVKV LSEDKRKNGT 120
  121 KVVQFEIGEF EKKHNMQMHI LIPAIGYDHK YQVQFEIKDP TVGNKETEKP DDNSNSGNTE 180
  181 TDNPVDNQNM ITDNKLRELV NKKVFNRKDL NTPITKEDLL QVKDLFLNTN EILDYSALKY 240
  241 MPNLKSLTVA NAKIKDPSFF ANLKQLNHLA LRGNEFADVT PLVKMDNLES LDLSNNKITN 300
  301 VAPLTEMKNV KSLFLSGNQI EDVTALAKME QLDYLNLANN KITNVAPLSN LKNVTYLTLA 360
  361 GNQIEDIKPL YTLPLKDLVL TRNKVKDLSG IDQLNQLQEL WIGKNEITDV TPLSKMTQLK 420
  421 ILNLPNNELK DITPLSSLVN LQKLDLEANY ISDLSPVSNL KKLVFLSFVA NEIRDVRPVI 480
  481 ELSKTAYINV QNQKVFLEET EVNKEVKVPI YEKDGEISTK IRLKSDNGTY SNGVVKWSTP 540
  541 GEKVYEFGVK DPFADTGIFF TGSVIQNVVE SKDGNTSKED EKTEVVEFKD VPKGHWSEEA 600
  601 INYLAKEKLF IGYGNGEFGF GDNITRGQVA LLIQRYLKLE NNLEQKTAFT DTKGNMYETA 660
  661 IDAVVQAGIM TGYGNGMFRP DGVLTRYEMS VVLQRVFQLK ENENSAENFK DVPNGHWAKG 720
  721 YVKALVDNKI SKGDGEGNFL GDNFVTREQY AQFLYNAIKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle