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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30019435, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIALTAVL GLSFGAGTQS AYAETPANKT ATSPVDDHLI PEERLADALK KRGVIDSSAS  60
   61 EKETKKAVEK YVENKKGENP GKEVPNGDQL TKEASDFLKK VKDAKADTKE KLDNPATGTP 120
  121 AATGPVKGGL NGKVPTSPAK QKDYNGDVRK DKVLVLLVEY ADFKHNNIDK EPGYMYSNDF 180
  181 NKEHYEKMLF GNEPFTLDDG SKIETFKQYY EEQSGGSYTV DGTVTKWLTV PGKAADYGAD 240
  241 AASGGHDNKG PKGPRDLVKD ALKAAVDSGL DLSEFDQFDQ YDVNGDGNKN QPDGLIDHLM 300
  301 IIHAGVGQEA GGGKLGDDAI WSHRWTVGPK PFAIEGTQAK VPYWGGKMAA FDYTIEPEDG 360
  361 AVGVFAHEYG HDLGLPDEYD TQYSGAGEPI QAWSIMSGGS WAGKIAGTTP TSLSPQNKEF 420
  421 FQKTIGGNWA NIVEVDYEKL NKGIGLATYL DQSVTKSNRP GMIRVNLPDK DIKTIEPAFG 480
  481 KQYYYSTKGD DLHTKMETPL FDLTNATTAK FDFKSLYEIE AEYDFLEVHA VTEDGQQTLI 540
  541 ERLGEKANSG NADSTNGKWI DKSYDLSQFK GKKVKLTFDY ITDGGLALNG FLLDNASLTV 600
  601 DDKVVFSDDA EGTPQFKLDG FAVSNGTEKK SHNYYVEWRN YAGSDNALKF ARGPVYNAGM 660
  661 VVWYADSAYT DNWVGVHPGH GFLGVVDSHP EAIVGTLNGK PTVESSTRFQ IADAAFSFDK 720
  721 TPAWKVVSPT RGTYTYDGLA GVPKFDDSKT YINQQIPDAG RILPKLGLKF EVVGQADDNS 780
  781 AGAVRLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle