YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29894973, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIWKIISN AISFVLFALM VFLAFVVISS KASGGDPTVM GYQFKSVLSG SMEPTFLTGS  60
   61 IIAIEPNKDG SKYQKGDVIT FKEKDQKIIT HRIIGVKDTN GKVMYETKGD NNNGPDLEPV 120
  121 LAENVVGKYA DITVPYVGYL LNYANSKAGA ALLLIIPGVF LLGYSAISIF GAIRSIDGEK 180
  181 KDKKVEQSV

Type	Start	End	Confidence
Cytoplasmic	1	9	0.48
Transmembrane Helix	10	30	0.52
Non-Cytoplasmic	31	149	0.94
Transmembrane Helix	150	173	0.81
Cytoplasmic	174	189	0.85