YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29894730, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFSERLKEE REKRNWSQND LAEKLHVSRQ SVSKWETGKN YPSIEIIIHL SDLFGITIDE  60
   61 LLRSDEELTQ KIIEDSKQLA YPKWKVFFDS LFMIGVFLFI AKIVVWMLNK FAGASITIVA 120
  121 DAPYVMNLLP LVFMIIGGIG SDKLKKIYK

Type	Start	End	Confidence
Cytoplasmic	1	85	0.99
Transmembrane Helix	86	106	0.93
Non-Cytoplasmic	107	119	0.76
Transmembrane Helix	120	140	0.88
Cytoplasmic	141	149	0.87