YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30018910, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVNKALTIA GSDSGGGAGI QADLKTFQEL GVYGMTAITA ITAQNTLGVQ GVYPVPLEGI  60
   61 TEQLNSIGTD VTPDAVKLGM LFSSEIIQIV AEQIKKFGWN NIVLDPVMIA KGGASLLQQE 120
  121 AVQALKEYLL PVATVITPNV PEAEVLTGVE IHNVEDSKEA AKVLHKLSAK YVLMKGGHAE 180
  181 YQGNEVIDFL FDGEEFIEFR SERIPSKQTH GSGCTFASAV TARLAKGYSI EDAVQEAKRF 240
  241 ISIAIEEPLN IGSGHGPTNH FAYKVNRTRV

Type	Start	End	Confidence
Signal Peptide	1	22	0.50
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.99