YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29894344, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFMRKKSFT VFVFLLAFSM LLSACGKSNN KEESTKEDNK KEVVTVEHAM GKTEVPANPK  60
   61 RVVILTNEGT EALLELGVKP VGAVKSWTGD PWYPHIKDKM KDVKVVGDEG QVNVETIASL 120
  121 KPDLIIGNKM RHEKVYEQLK AIAPTVFSET LRGEWKDNFK FYAKALNKEK EGQKVVADYE 180
  181 SRMKDLKGKL GDKVNQEISM VRFMPGDVRI YHGDTFSGVI LKELGFKRPG DQNKDDFAER 240
  241 NVSKERISAM DGDVLFYFTF DKGNEKKGSE LEKEYINDPL FKNLNAVKNG KAYKVDDVIW 300
  301 NTAGGVIAAN LLLDDIEKRF VK

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	322	0.99