YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30018675, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYKWLYMGL IFSIMMALVP VSALAYTNTP HNWGIPRPKN ETVPDAGKLY TDLLQKNGGF  60
   61 YLGDTKKKDI YLTFDNGYEN GYTGKILDVL KEKKVPATFF VTGHYIKTQK DLLLRMKDEG 120
  121 HIIGNHSWSH PDFTAVNDEK LREELTSVTE EIKKVTGQKE VKYVRPPRGV FSERTLALTK 180
  181 EMGYYNVFWS LAFLDWKVDQ QRGWQYAHNN VMTMIHPGSI LLLHAISKDN AEALAKIIDD 240
  241 LREKGYHFKS LDDLVKGNQP

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	260	0.99