YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229125706, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTKHRILFI GAGRMAEAIF SGLLKTSKEY IEEIIVSNRS NIEKLKQLQH QYNVSTTTDW  60
   61 KQHVTSVDTV VLAMPPSAHE ELLAELSPLI SNQLVVTVAA GIGPSYLEAR LPKGTPVAWI 120
  121 MPNTAAEIGK SISLYTMGQS VNEIHQETLQ LLLKGIGTSQ LCTEEEVHQL TAVTGSAPAF 180
  181 LYYFAESLIE ATKSYGVDEE TAKHLVIQMI SGSASMLEQT QNPANLREQV TTPGGSTAEG 240
  241 LKTLYEYNFS EAIQKAVEAT NKKARGK

Type	Start	End	Confidence
Signal Peptide	1	18	0.68
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	267	0.99