YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29542557, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKIFVAILM GSDSDLSTME TAFTELKSLG IPFEAHILSA HRTPKETVEF VENADNRGCA  60
   61 VFIAAAGLAA HLAGTIAAHT LKPVIGVPMA GGSLGGLDAL LSTVQMPGGV PVACTAIGKA 120
  121 GAKNAAILAA QIIALQDKSI AQKLVQQRTA KRETLKKADE NLQTQL

Type	Start	End	Confidence
Cytoplasmic	1	58	0.69
Transmembrane Helix	59	79	0.66
Non-Cytoplasmic	80	98	0.76
Transmembrane Helix	99	118	0.50
Cytoplasmic	119	166	0.61