YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6_COXBU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYAQPKLTSA EYVQHHMSHW KLNLHNFTFT DGGFWTLNLD TLIISVVLGA LFILIFYIVA  60
   61 RRATASVPGK WQNAIEMAVE AVDGTVKDSF HGDRSLVAPL ALTIFIWVFL MNFMDLVPVD 120
  121 LIPRLFQMGG VEHFKAVPTA DPTLTFAMSI TVFVLVIFYN FKMKGAIGLG KEVLSRPFGW 180
  181 YLMPINVIFR LIDEGVKPIS LALRLFGNLF AGELIFILIA LLPWWSQFTL GMVWTLFHLL 240
  241 VITVQAFIFM MLTVVYISLA AESH

Type	Start	End	Confidence
Non-Cytoplasmic	1	38	0.91
Transmembrane Helix	39	60	0.91
Cytoplasmic	61	95	0.94
Transmembrane Helix	96	119	0.84
Non-Cytoplasmic	120	141	0.86
Transmembrane Helix	142	161	0.93
Cytoplasmic	162	204	0.84
Transmembrane Helix	205	225	0.92
Non-Cytoplasmic	226	235	0.70
Transmembrane Helix	236	259	0.90
Cytoplasmic	260	264	0.79