YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29654951, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSKKILIV GPAWVGDMVM AQTLFMCLKH RYPDAQIDVL APAWTKPLLE GMPEISGTID  60
   61 SPFGHGDVRL RERYRLGVAL RERGYDQAIV LQNSYKSALI PYWANIPQRT GWVGEMRYGL 120
  121 LNDIRRLDKK RLPLMIHRYI ALGLGKGVPL PIDLPRPQLR ISPAKRTTAL SRLALQEPAA 180
  181 PLLALCPGAE FGPAKQWPAE YYAEVAKKKL ADGWQVWIFG SSKDKVAADR IESLTEGRAR 240
  241 NLAGVTTLSE AVDLLSLASG VIANDSGLLH VAAALGRPVI AVYGPTTPSF TPPLSKKAET 300
  301 AKLDLPCSPC FKRECPYGHQ QCMKSLKPAM ILETMEKMNY VSL

Type	Start	End	Confidence
Signal Peptide	1	21	0.91
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	343	0.99